As a side issue, so-called filter bacteria are actually present in the substrate in greater levels than the filter, together with a whole host of other micro-organisms.
Do you mean in general Sue, or in your Betta tank? In a ‘well stocked’ tank there are far more in the filter. Easily tested by trying to cycle a tank with substrate and no filter. Unless there’s an undergravel filter in place there simply isn’t the oxygen flow within the substrate to support many aerobic bacteria, and they will only be on and near the top.
A canister filter can support enough bacteria to handle a few thousand small fish (an 8” fish being equivalent to c500 1” fish, and so on).
I’ve never had a high tech tank, and plants have always really been secondary to the fish for the most part, but I know that a change in any parameter can affect plants and especially algae - a change in amount of flow, temperature, pH, hardnesses, light wavelength or intensity or duration, etc.
The prevaling belief used to be that it was the slightly higher CO2 levels and lower O2 levels that were beneficial to plants with low flow/filtration, but the presence of ammonia sounds just as likely.
It’s amazing that just a few hours of low water level can have such a big effect. I’ve never made that connection. Matt how long was it low for? Did things all revert back again in the end?
I’ve been keeping algae as long as I’ve been keeping fish. I prefer low lighting and I’m on intimate terms with quite a few different species including the brown diatoms. But I’ve no idea how to get rid of any except by changing something and seeing what happens. For me, brown diatoms like low lighting, and the black tufts like tanks with very low lighting, and low flow. Although other factors are no doubt also involved.
With terrestrial plants I’m quite green fingered, and they need everything - light, temperature, watering, food, humidity - to be in an acceptable range. If any one of them is off, the others are too. For example if a plant isn’t getting enough food but the other parameters are good, this also means it’s getting too much light and water (for the amount of food it’s getting). If it’s not getting enough light then it’s getting too much water and food for the amount of light... etc.
I assume aquatic plants are probably similar, and that everything needs to be balanced, within range?